Société : HELHa Lieu : Charleroi Wallonia Site source : Talent BE
e-OMIX is a new project launched a UCLouvain and aims at establishing a new bioinformatic hub for sharing and leverage omics data (collected from different platforms quantifying cellular molecular content) across different laboratories in Brussels and Wallonia for research and clinical purposes.
Role•Build bioinformatics pipelines processing single-omics data (mass spectrometry, high-throughput sequencing, etc.)•Implement specific cloud-based storage and computation.•Develop solutions for the exchange and interoperability of large biological datasets (in accordance with HL7 FHIR standards).•Develop and deploy specific modules to optimize experimental workflow, such as Quality Control or sample tracing.•Help with designing automated or semi-automated statistical analyses.Qualifications•PhD in computer science, software engineering, or related field, or Master’s degree with 5-year work experience (senior position) or Master’s degree in computer science, software engineering, or related field (junior position)•Demonstrable experience with the following tools:
–Object-oriented programming (Java or C++) –Data science, machine learning (Python), and/or statistical computing (R) –Databases (PostgreSQL)–Responsive Web applications (Spring, Vue.js, Bootstrap, etc.) –Professional software development (e.g., unit testing, version control, continuous integration, release cycles, Git, etc.) –Cloud architectures•Interest in biological or medical research•Ability to work both autonomously and within a team.•Good written and oral communication skills, English proficiencyAdditional assets•Experience in biology, bioinformatics, health informatics, or in any position involving biological or medical data•Experience with Kubernetes/Docker Swarm, RESTful APIs•Knowledge of R Bioconductor package•Familiarity with open-source software distributionOur offer•A collaborative work environment:
The project is conjointly led by the Computational Biology (CBIO) and Computer Engineering (INGI) units from UCLouvain and will involve other major academic actors.•The collaborator will be partly based in the A6K startup incubator in Charleroi, and partly home-based (with occasional travels to UCLouvain’s Brussels or Louvain-La-Neuve campuses)•Flexible work hours•One-year fixed-term contract, with a possibility of extension.•Reimbursement of public transportation cost Complément d'information The position is a fixed-term contract.
Funding is available until December 31st . HELHa CharleroiWallonia
